[QIIME2] qiime tools import type 정리

qiime tools import --show-importable-types

 

ortable-types
Bowtie2Index
DeblurStats
DistanceMatrix
EMPPairedEndSequences
EMPSingleEndSequences
ErrorCorrectionDetails
FeatureData[AlignedProteinSequence]
FeatureData[AlignedRNASequence]
FeatureData[AlignedSequence]
FeatureData[BLAST6]
FeatureData[Differential]
FeatureData[Importance]
FeatureData[PairedEndRNASequence]
FeatureData[PairedEndSequence]
FeatureData[ProteinSequence]
FeatureData[RNASequence]
FeatureData[Sequence]
FeatureData[Taxonomy]
FeatureTable[Balance]
FeatureTable[Composition]
FeatureTable[Design]
FeatureTable[Frequency]
FeatureTable[PercentileNormalized]
FeatureTable[PresenceAbsence]
FeatureTable[RelativeFrequency]
Hierarchy
MultiplexedPairedEndBarcodeInSequence
MultiplexedSingleEndBarcodeInSequence
PCoAResults
Phylogeny[Rooted]
Phylogeny[Unrooted]
Placements
ProcrustesStatistics
QualityFilterStats
RawSequences
SampleData[AlphaDiversity]
SampleData[BooleanSeries]
SampleData[ClassifierPredictions]
SampleData[DADA2Stats]
SampleData[FirstDifferences]
SampleData[JoinedSequencesWithQuality]
SampleData[PairedEndSequencesWithQuality] #보통 illumina sequecncing쓰면 보통 요걸루!

        Sequences with quality scores, where each set of sequences is associated with a sample identifier

        (i.e. demultiplexed sequences).

SampleData[Probabilities]
SampleData[RegressorPredictions]
SampleData[SequencesWithQuality]
SampleData[Sequences]
SampleData[TrueTargets]
SampleEstimator[Classifier]
SampleEstimator[Regressor]
SeppReferenceDatabase
TaxonomicClassifier
UchimeStats

 

등이 있고 자세한 설명은 아래에

https://docs.qiime2.org/2019.1/semantic-types/

Semantic types — QIIME 2 2019.1.0 documentation