Problem
The 20 commonly occurring amino acids are abbreviated by using 20 letters from the English alphabet (all letters except for B, J, O, U, X, and Z). Protein strings are constructed from these 20 symbols. Henceforth, the term genetic string will incorporate protein strings along with DNA strings and RNA strings.
The RNA codon table dictates the details regarding the encoding of specific codons into the amino acid alphabet.
Given: An RNA string ss corresponding to a strand of mRNA (of length at most 10 kbp).
Return: The protein string encoded by ss.
Sample Dataset
AUGGCCAUGGCGCCCAGAACUGAGAUCAAUAGUACCCGUAUUAACGGGUGA
Sample Output
MAMAPRTEINSTRING
내 답
table = {'ATA':'I', 'ATC':'I', 'ATT':'I', 'ATG':'M',
'ACA':'T', 'ACC':'T', 'ACG':'T', 'ACT':'T',
'AAC':'N', 'AAT':'N', 'AAA':'K', 'AAG':'K',
'AGC':'S', 'AGT':'S', 'AGA':'R', 'AGG':'R',
'CTA':'L', 'CTC':'L', 'CTG':'L', 'CTT':'L',
'CCA':'P', 'CCC':'P', 'CCG':'P', 'CCT':'P',
'CAC':'H', 'CAT':'H', 'CAA':'Q', 'CAG':'Q',
'CGA':'R', 'CGC':'R', 'CGG':'R', 'CGT':'R',
'GTA':'V', 'GTC':'V', 'GTG':'V', 'GTT':'V',
'GCA':'A', 'GCC':'A', 'GCG':'A', 'GCT':'A',
'GAC':'D', 'GAT':'D', 'GAA':'E', 'GAG':'E',
'GGA':'G', 'GGC':'G', 'GGG':'G', 'GGT':'G',
'TCA':'S', 'TCC':'S', 'TCG':'S', 'TCT':'S',
'TTC':'F', 'TTT':'F', 'TTA':'L', 'TTG':'L',
'TAC':'Y', 'TAT':'Y', 'TAA':'', 'TAG':'',
'TGC':'C', 'TGT':'C', 'TGA':'', 'TGG':'W' }
input1 = 'AUGUACGGAGUUGCCAAUCUACCACCGCAUUCUUCAAGGGGAAGGUGGAUGAAAAUCAAGGUAAAUUCGUGCGGGAAGCCCUUCUCCCUUUGUGGGCGACUAACCAAACAAGCAGCCAUCAACCGUGGGCCAACUGGGGAUAUUAACAGCUAUGAAGGGGCUAAAAGGGUUGCCUUAAUCCUAGAACGUAGCCUACCCAUCCACUUUUGUUGCCCGAGGUCAGCACCACUGAAAAUAGAAACUUCGCAUCGGAUGUCGCUCUCUAGACCGACCGGCGGAACCAUACACCGAGCUGGCCGCCCCACUUACUUCGGUAUCGGUGGGAAUUAUGGCCCACCCUCAUCUAUAUGCUGCCAUGGUAUAUAUGAAGUUUGCUUUAAAGUUUGUCUUAUAAUAAAUAUAGUUUGCCGCUUGUGUAGGACCAUUCUAACAACCCGCUCGAAUCGUAGCGAUCCCCCUUUUAUGAGGUGUGCUAGGCUCGGAGAAAUACAUGCCUACACGCGCCAGUCCUCGCGACGGAGGUGGAUCAUUGGUGGUAACGCGUCCAUACUGAUCGUGCACACACGUUAUCUGGAGGUAGCGUUCGUCUUGGAUUCGGUAAAUUGGCUUAAUGGUAGUCGAGUGGACUGUAGUGGGUCCCUAACAAGCCGGUCUUCAAUAGAUGUUUUUAGUGCCCGAACAAUCUGUCCUACCAUUACGUGUUUAACUCAGUUCCACAAUGUCAUAAGAUCCCCUUACCGGGUCACUUGCAAUCUCGCUCCGGAGGCGAAUCGGAUGUGGGGAAGGAUGCCCAUUUUACACUCGAAUCCAUUGCUCAUUAACCUUCAUAGGAUGCGCUAUUUUCGCAGGCCAUAUCCAAUACCCCGUCCCACAGCGAUUGGCGCCCGAUAUCACUGUGCUGUUCCUGUGGAAAGUUGCGUGAUGUUGCCGUCCGAACUGGGUCGUGUGUGUGACCGUUUCACUCGUGUCGGCGCGUCAACAAGCCUAAUCGCAACAAGGUACAGGAGUGUCCGAGUAAUCUAUGACAUGGACUGGGCACACGCAGCAACCCUAGCGCCCCUCCUAGGAACAUUUUACAUAUACCUGAAACAGCAGAAAAAUUGCACCCAUGCUUCCGGUGAACUAGGGCGAGGGCAUACCUGUGCGUAUCGGAUAAUGAGUAGAUGUUGUAGUGCCCCUAGUUAUCCUUCUGCCUUGCUACAGUUGGGCAGAUUUCCUCUUGACGUACGCGUAAUCUCUUUCUCAUUGGGGUGCAUAUAUUCGGUAGAGUCAAGAAAGCUAUCCUGGAUAUGCACCGUCUGGUCUUCAAUCAGUUUUCGUUCCAGUGCCCCGUGCCAGGCAGCCUCGACUGCACGUAAUCUCAGAAGGGGUUGUAUUCCGGUGACUAACCAGACGUCCAUCAUAUGGGACGAGAAUUUACUCAACUGCCUGCUGCGGGAUGUAAGUGAUCUCUCAAAGACCGCUGGCGUUCCCAUGUUCCCAAAAAGACACAACGCUUGUUUACGUGUAUUCAUUGCAAGACACAGGGGCGUGGCGUUGGAGAGAACCUCGCACAUAACACGGCCACAUUCAAAGCGGGACAAAUUCCGCCUUCCAGUAGCGGCUUAUCUUAGAGUAAGGACGACCCGCCUCACUCAAGCUGCUAUCCAAUCCUCGAAUAACUCCGUUGUGUUUAUGCGCAAGGUCUCCUUCGAUGCUUUAGUCACUGGAUAUCGGUCCGACGUAAAUCUGUUUAUUUGCUCUUAUUUCAUUGUGCAGGGGCCGGUGACACAGGGCCCUUGGUACGGUUUGAAGUGCGCCGUGCCACGGGCGAGAUGGCGAACAAAGACUCCCAUCGCGCACGAGAGGCAAGAUCCUACAGUGACGGAACAUAGUAGCGCACUACCGAAUCGGGAUCAUAUUGCCAUAAGUGAGUCACAUCCAUUCCUGGACGUGAUAUGUAUGUCUUUGUCACGUCGAGUGAUACAGCGCGCUUGGGCGGGAAGUCAUUCACGGUUGCAGGGGUCGCAAUGGUGCCAAUGCAGAACGACCUGUAUUCCUGGGGUGGGGACCCUGCAACGCGCGAUUAAAUGGGAAGUGUGCUGUAAUCGGAAUUACUCCUUGGAGGAAAUGGCGUCUGUUCGGGGUGUGGCCAAUUCGGCAAAAUCGACAGAGAAUAGUCUCGAACUUGAUGACAUUAUACUUGCUUACCCACCGAACGCCCGGGCGAGGCCAAGUCGCAUCCUGAUAAGUAAAGGUCGCUCGAGAAGGCGGCCCAAAGAAUUCCGCAGGGGCGCAGGCACAUACUGGUAUCAGGCGCGCUGUGUAUUCACGCUGGAAUGCCGCGGGGAUCGCCGGGCUUACAAGAACUUCGUACGCAUACUAGACCCGUACCGUUCCCACAUGAAAAGAAGUAAUCUAGCCGUGUUGCUUAACGCUAGGCUGAGGGCCUAUCGAUACACUAGGCACGGCUAUCCAAGCACAAAGAGACAGUGUAAGGCUGCCAUACAAGACCGGCCCGAAAGUCAGGCGUUAAUAGCCUCCACCACCACGACGUUUUUGUUACACGUAUGCCGAAAUUACGCCCUCACAUCGCACGCUUGGCGGUAUUGCUUAGGACCCGAACGGCCGGAGCUCAGCUUAUAUGCAAUCGCCUCAUGCCUCCGCCCGGGGAAGGAGGAUGUCAGGUUUAGUCAAAAACUAAAUGAAGAGUAUAUGGUGGUGGGUCGCCCGUUGUGCCACAGUACUACAGUAGGCCGCGCAUUCAUACCUGUUUGUCGGUGUCUGACCCACUUUGCCAGAGUCCUCAAGGUAUCUGUCCGCAAAUUACCGACGCUUCGUGAUCAUAUCAGGCGAGCACACGACAUUUCAUGUCCCUGGACGCGCUGGGAUGUAUUUCGCUCAUACCAUUCCUGGGUGUGCGAGCCUACCAUCAUUAUCACUCCGGUUAGAUAUGUUUGGGACAGUACGGCGGAGAAAAGAUACAUUAGGAGUUUGUCUUGCCCAGGUGUAACUUAUUUAGAGCUUCGAGGAUUAUCCAUAGAUUUGGGCAAACUGCACGUUCGUCACAAGGGUGAUUUAUUAGCCAGUUCGGAGCCAAUAUACAGCUCAUUGCCGAUAGGCGCAUGUCUGUCCGGCUAUGAAGAGAUCGAGUUACAGUCCAGCACAUCACUAGGUGCAUGCUGGCGCGGACGACACCUAUUGCGCCUUACUUAUGCCGGCUCAACGUCAUAUGAGGCCUUACUGAUGGCGUCUACUUCUCUGUCUGACGUCCGACCGGUAGUUGACACUAACUGCAUACCUUGGCGGCUUGUGGGUGGGGACGCUAAAGAAUCCUCGGACGAAGCUUUUGCGAUAGAAGCCUUCUUGGAGGUCCGAAAACAGGCGCAAGGUUUACUGCUCUAUAAAGGGGUUGUGAUUCCUAGUUCUCCGCCACCCGCCCCAGCUCCAAGUGCCCCCGAGGGCCGAAGCAAGUCGCCAUUUUUAAACACGCGUCAACCGAGCGCCAGUGCUGGACGAGCUCCUGAGCAACACGUAACGUUGGCGGAACGACAUAAUUCCUCCCUAGCUCAUUCUAGUGGGUUCUGCUACGAACGUUCUGUUAACACUGGUCAGCGGGCCGCCGGCCAAACUGAACGGCAUGGCGUUAGUCUGAUUAGAAGUGACGGUCCCUUUUUGACCUCGAAGCAUUUUUGGGACCACUGUAACGGCAGCGUUCCAACAGACCCCAAGCGUGCUACCGCGCGUAACGAGCUUCUCAAACGUAAGGUAAUCCCUUCAUAUUUUCCGUCCUGCGCUCCGCCACUACAGAGGAUGUGGACCUUCUCAAGACAAUUGUCUAAAUGGCACCGCAUGCGCUAUAACAUAGAUCUAUCUGUGGGACUUCUGUCCAGAUGGGCUAGGCAAUAUAGGGCUUCUAAGCACUCAAUGACUACAAGGCAUGCCCGACGCGAGAAGGUGGACCAAGUGGGGGUAAAGGUACUUGUGAAACCGAGGCUGGUACAUAGUAGGAUUUCCGUCCCGUACCAAUGUGGGAUUGGACGCCAGUCCCCGAUGUCUCAAAGAAAGUUAGUCCGGAUUAGCCCUUCACAUAACAGGGGUGAGGAGUGGGAGGAAUUCAAAACUACUCGUAAUGAAUUCAGGCCCCGACAGAUUCAAGCGUUAUUGAGAUUGUCAACAUUUCCGCGAAGCGUCGUCGCUCGUGUCCCGACACCCCUAGGUAAUUACCUGGCGUCAUCAGUUCCUGAACCUUGGAGCCCAGGUCGCUGGCUUAUAUAUCCAAAGCUCCACCAGAUAUCGGAGUCAACCCAUACGUUACGGGUCUCAUGCCAUUUUGCAUGUCAGACGGCGGUGUCUCCUAGUACGGUCCGCGCCACUCCUAGGAUUUCCGAGGCACUCCGCGGUCACUCGGCCGCUCGGAUACUCCACCACACACUUAGGUCGAGGUGGACAAGUACCGUCAGGUUGUAUACGUCGAACGACAGCAAACCCAGUAAUCGUCAUGUUGCGAGCCCUACUAAGGAUAGCAUGUCUCCCCUCGUGCUUAGGGUCUUUAAAUGUGUCUGCUUUCACAAGCGUCAAUUAGAGAACCCUCCCUCGUUGCACUUAAACAUCCUGAGUCUAGCAACUCGCGACUGCCCGGCACCGUCUGCAGCAACCGUGGGUUUGUACCGCGUCAUGUGCACUAUGGUAUUAAGUGCGACAGGGCUUACGCCGAUAACCCAUAACUCGACUAAACAAAACGCACUUAUCCUCCAACUCUUCAAUUCCUGUCACCGGGUCUUCGUCGUGCGUGACAACGGUAACCGCCUUACCAGAGAGCCUAAUAAACGAUACCUGCUGACGAGAGACGAUCAGACAGAAGACACUCUCCCGUCAGUGGGGCCCAUAUUUGAGGUAAGGCCUAUCAAAUUCCUCGUUCCCACCAGGCGCGAUGCAACAGAUAUCCUAGUUACAACUAGGGUCUCGCCUUUACUCGUGGGUAAAGUCUCCUUGUGUGUUAUUCUGAUGAGCUGGUGUAUUGACCACGAUCACAGAUGUAAGCGUCGGCGAAGCUUAAUACUGUGUAGCACGCGUUUUCAUUGGGAGUGUGAUUGCGGUCCCAUCAUCUAUACACAUGCUGGGCUGAACGCACUAGACAUACCUAUUUACCGUCACGCUAACCGCUUAUUUUCUGCAACUACAAGCGAGCCGGGAACUCUCUAUGGAGUUCGGCUGCAAAUCCAUAAUUACUCCUCUACCACACAAAGUGCGGGUAGGGGGGCUUAUUAUCACUAUCAGCAUCUAUUAGCAACCUAUGUGGCAAGAACCGUUUCUCCAGUACGCGCCCCUAGGACCAGGCUCCGUUCGCCCGCGCGGGCUGAAGUCGUGCGAUUGGGCUUACGCACUAGAAUUAGUGGAGGAGUAACGCGUACCGUUAACCGUGGUUUUGGUAACCACUCUGAACACGAUCUAUUGAAGAUAAGGUUCCUAAAAAAUAGCAUAAUCGAGCCCGGAGCCUCCACAUGUUUGACCGGGGUGCUCUCAACGCACCCAGUUGGCGGCCCGCGUCUUUCCUUGUCCGCGAGAUUCACUGCAUACGCAAGAUGUUUAAACGCACCGGUCCCAGAGGUAUUAAGAGCGAACCGAUGCAUGGGGGCGCGAGAAAAGAGAUGGAACCAGGCGAGGCGAACUACUGGCGGCCGAGAAAGCGGCAUGGCCGUGAAAGAUAUGGAUAGAACACUUAUGCCCUCUCUGCGUUACUGGGACCGUGGGCAGGAUCACAAGGCACAGGUGAGGAAUAGGUCAAAUCCUCUGAACCGGACCGUAUCGACUUACGGUGAUGAUCAUCGAUCGAGGCAGAGGCUUCGCUUGCUAGGGCGGAGCUUCGUGCGUGUCUGUUUUAAAGGGUUAGGUAUUCGGACAUACUACUCAGAAAAGCACGUCUGGUUGGACGCUAGAAACAAACCUGGGCUGCAACUCUACUCCGCUUCUGAAACGGUCUUCUGUUUUGGACGCGCAAACCUAAAUUUAUUAAAGGCGACCUCUGUAUUACACUUGUAUCGUCUAUCGCGUCCUAAAAUUGCAAUCCGCUUGAUUAUGUCCUUUCCGGAGCGAUCAGGAGGCUACCUCUCGCCGCAGGACAGCAAUCCCUCAAAAACUCACGCACGGUGGCUAUUCCCUCCCAGCGAUCGGUUAGAGUGGGAACGAACGGAGUCAUAUAACGUGUGGGCAACCUCCAAGGUCCAACGGGUCGUGAUUAAGUGGGACAUUAGUGAUGUAUCCAUAAAAGUUUUUUCUCAAAUCCCACGUCUCAGAAUAGCGCACGUGUAUAUUGGAGCCGGAGAUUCUCAACGACUAGUGACCACGCGAACCAUGAGCACUCCUCACGCUCUUGCCAAGUGGGGUCGAUCCCUCACUAUACAGAAUGUCAAUCAGGUGGGCGCACGCUAUAGCGAUCUUAAAGAGAUAAUCUCUUCGGAUCUUUCCAAUCAGUGGUUUAACUUAUUGCCCAUUUCGCAUGUACUCGGGUGGUGUCUAUACGAGGCAUCCUGGCGCUGGUCUACGAUUGUUCCGCCUAGUUCUUUAAUGUUUUUGGAACUAAAAGAAUACCGGUUUCUAUCAUCUGCGGCUAGCAGUUCACUUGGCCCCAAUUUCGUAAGUUCGCAGUCUUGUGAAGAUGUACCAAGGAGCCAGUACGUUAGUCUAAAUGAGAGCUUAAGGUUUCUAAGGUUUCACGAUCCGGUUCGCGCGUCCCCCCAGGAUUAUGAGGGCUUACGAAUGAACGCUAGGAUGGCGUGUGACCUAUUUACAAUGUUCCAUGGGAUUUACGCUACCAGUUUUCACCUAGACUCCGAACAAAUUGUGAUGCGUGCCGUAGGCGCGGGGAUGAGCCUCUGGCCAACGAGCUGGAGGCUGAAAAUAGAUCGAGGUUCCUCUCCGAGCGGCUAUAUUAGUAUAGUGAGCCUCAGAAAGCGGGCGAGUGUAAUGGGGAUCCACUUCUCCCAUUUAAGAAGCACCUCGUUCAACGAGCAUUGUUUGUACGACCUACUGUCUGCCGCACUGAAACACCUCUGGGUUCUCGCCGCUGCGAUGCGGCCGGAUUGCUCCACUAUGUACUACGCCAUGCUCGCCAGGUCAUUAUCCAGGUUCCUCGGCGCGGAAGGGCUGUUAGAUGAAUCUCAUGGGAUGGAUGUGUGCCCGGGUUCCCUGGGCCUACUCUGCAAAUACUUGGAGAGAGUAAGAUCGCGGGUACAUGUUUCGCUUCACAUAGAGAUUGCCCCUCCUAGGGAAUUUCCAAGCACAGCGCGUUGCCUUCCAGAACCAAUAGGAUUGAGGCGCCCACCGCGGCCACGGCUCGCCUGGCAAACACCUAUUGGUACGCCGACUAGAUGCGCGUGGGCUAUCAACAUGUAUUCCAUCACGACUACCAGCAUCUUAAGCCCGCCUCAAUCGACCACUCACCCCAGAUCUGCAGCAUUACAGAGCCCCGGCACAUCCUCGCCCGUCCUAUUUUUACUAGUCUGUAGAGUGCAUGCGUGGUACGUCCGCAUCUCACCCGCAUCCAAUAGAUCCUCGAUGACGAGUGAAAGAAGAUUAAAAGCGUGUUCGAGGGGUGGCUGUCUAGCAAGUCGAGCCCCGGGGAGUGAGGCGCAAGAGGUUCGGCCUGUCUGUUUACAUUUGGGCCGUCCGAAGGCCUUAAAUGAGACCCUCCACCCCGGUGCAUAUUAUCGUGAGCCCUACAGUGGGACGUUGUUUCUACUUAAUGUACUCCUUCUGGCAUUCCCUCUAGUUUACCCUCUUUCAAAACAUCUUCGUGCCUCCUCACUUGAGAGCGAUUUCCUGGCAAGAUACCUUGGCGCUUUUAAAAUCACAUCUUCCGAGACGUUCCGACGUGGAUUCGUUUACAAGGCGAUUUGGGCCGCACGUUGGUCAUAUGUCGAUAAGAACUGGCGCGAGAUCACUUCCUUAGUCGCUACCUCUGUGUUCGCAGCCACUAUGUAUCCGGAGUUGGCGUUCUAUGUGUGUGCCCACUCAAAACUCUGGUCUGAUGCAGGUUCCUUGCAAAGGGAAGGUGAGGGACCUGCCACAUGCAAUGUUAUAAGUGGUUGGGCCGGGUUUACUCAGGUUAUCACGCCUGGACGCUGA'
input2 = input1.replace('U', 'T')
for i in range(int(len(input2)/3)) :
print(table[input2[i*3:i*3+3]], end="")
무식하게 단백질 서열 코드 그냥 입력...하지만 이제 보기 변하다
file open 귀찮아서 그냥 서열 input에 때려 넣음
추천수 높은 답들 by Gaik Tamazian
codon_table = 'KNKNTTTTRSRSIIMIQHQHPPPPRRRRLLLLEDEDAAAAGGGGVVVV\0Y\0YSSSS\0CWCLFLF'
nucleo = {'A': 0, 'C': 1, 'G': 2, 'U': 3}
f = open('rosalind_prot.txt', 'r')
seq = f.read().rstrip()
f.close()
protein = []
for i in range(0, len(seq), 3):
protein.append(codon_table[nucleo[seq[i]]*16 + nucleo[seq[i+1]]*4 + nucleo[seq[i+2]]])
print(''.join(protein[:-1]))
진짜 엘레강스한 풀이(대댓글)
1D를 3D로 해석한 풀이
진짜 머리 좋다..
반응형